BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028E11LP1|AL428926
(852 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1664 1664 0.0
>3x_Contig1664
Length = 15696
Score = 1664 bits (837), Expect = 0.0
Identities = 846/851 (99%)
Strand = Plus / Minus
Query: 1 gagatatacggcctcaaaccaaactcacaagtagcattaggaacttgtaacatgatcatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14073 gagatatacggcctcaaaccaaactcacaagtagcattaggaacttgtaacatgatcatc 14014
Query: 61 cgtgttgtttaggttatggccctgtttcctcaatttctcaagtctttacgccgaacaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14013 cgtgttgtttaggttatggccctgtttcctcaatttctcaagtctttacgccgaacaata 13954
Query: 121 taccttgtctttcgctgtttttctcgcctcctccaacaaaaggtgctgtctttatatatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13953 taccttgtctttcgctgtttttctcgcctcctccaacaaaaggtgctgtctttatatatg 13894
Query: 181 tcaaaatgcaattgtgattccaattgagaagagagtgcctttataaatrtaaaaaatgga 240
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 13893 tcaaaatgcaattgtgattccaattgagaagagagtgcctttataaatgtgaaaaatgga 13834
Query: 241 aataaaggttttcttttcgtgatcatttatgcaagcttggcaaaatttacaatcaagaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13833 aataaaggttttcttttcgtgatcatttatgcaagcttggcaaaatttacaatcaagaat 13774
Query: 301 aagggcgagtagcaagaacccgatgatatataggagtaagcttctaaggtataggaaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13773 aagggcgagtagcaagaacccgatgatatataggagtaagcttctaaggtataggaaaac 13714
Query: 361 ctatttgcagaatttcatcagacaaagggtctgaggaaggaatctgtaactgatccttcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13713 ctatttgcagaatttcatcagacaaagggtctgaggaaggaatctgtaactgatccttcc 13654
Query: 421 acaacagtactgtttacaatacgcagctattcatgtgtgaaccggttgtgggtgtttaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13653 acaacagtactgtttacaatacgcagctattcatgtgtgaaccggttgtgggtgtttaga 13594
Query: 481 aaaaaaaaaaaavaacactacatacatcgctgcctgttcttcttgttctgcgttacttat 540
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13593 aaaaagaaaaaagaacactacatacatcgctgcctgttcttcttgttctgcgttacttat 13534
Query: 541 aataataatavgtcattctctacaaagttccttcgtgtctgtgcaataaatcacatcaac 600
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13533 aataataataggtcattctctacaaagttccttcgtgtctgtgcaataaatcacatcaac 13474
Query: 601 atataaatactatagtcattacttaaccgtaaaggtgcggaaaatatgtatgatgaagta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13473 atataaatactatagtcattacttaaccgtaaaggtgcggaaaatatgtatgatgaagta 13414
Query: 661 atgagtaagatgagatgcatttccgaaacgaaggaatggacacggcaatttcgtgctggg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13413 atgagtaagatgagatgcatttccgaaacgaaggaatggacacggcaatttcgtgctggg 13354
Query: 721 atggaacaggttttcatgattccaatcatttcttgtcgcacccttttactcgcaattctt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13353 atggaacaggttttcatgattccaatcatttcttgtcgcacccttttactcgcaattctt 13294
Query: 781 gactcttgtaaatcttgagcagtctcacaacagcggaataacgttgctctggcgggaata 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13293 gactcttgtaaatcttgagcagtctcacaacagcggaataacgttgctctggcgggaata 13234
Query: 841 aatggataaaa 851
|||||||||||
Sbjct: 13233 aatggataaaa 13223
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,327
Number of Sequences: 1807
Number of extensions: 13327
Number of successful extensions: 224
Number of sequences better than 1.0e-20: 1
length of query: 852
length of database: 10,358,551
effective HSP length: 16
effective length of query: 836
effective length of database: 10,329,639
effective search space: 8635578204
effective search space used: 8635578204
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)